Well, I suspect what you’re seeing is safe to ignore… however, if you’d like to dig into that a big more, I poked around a bit and found some examples of other people who saw that issue with rkhunter and MySQL:
Thanks for the links. Much appreciated. I received my daily scan report from RKHunter this morning with warnings as per before. It also stated to chmod /var/tmp to 1777 (it was 755). Strange as I had not changed this file. I have changed it back.
A month ago I was unable to create a symbolic link from /var/tmp to /tmp which is mounted with restrictions. After a lot of searching and reading I found out Centos 7 uses /var/tmp differently to CentOS 6 in that it creates is own mini-processes there and I was unable to take a backup, clear /var/tmp and create the link. It still said files were still in use.